BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039G02SP1|AL430747
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1052 1136 0.0
3x_Contig708 526 e-149
>3x_Contig1052
Length = 4051
Score = 1136 bits (572), Expect = 0.0
Identities = 597/604 (98%), Gaps = 2/604 (0%)
Strand = Plus / Minus
Query: 305 caaaaaattggaatagaaaaccggttaatagctcatcccatcaggacatgtctactgcag 364
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4036 caaaaaattggaatagaaaaccggttcctagctcatcccatcaggacatgtctactgcag 3977
Query: 365 taccagatcaatgatccgtcaggttcttctcctgtcccaatcaataattgacgttaatat 424
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3976 taccagatcaatgatccgtcag-ttcttctcctgtcccaatcaataattgacgttaatat 3918
Query: 425 agacgtataggtatatatgtyattgtagcatactcatctccccagcgtaggaagcaaaaa 484
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3917 agacgtataggtatatatgtaattgtagcatactcatctccccagcgtaggaagcaaaaa 3858
Query: 485 tgaaaaaaaaaaaaaaasatagtcatgatgaagataaagaaagagttctggtagtaggga 544
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3857 tgaaaaaaaaaaaaaaagatagtcatgatgaagataaagaaagagttctggtagtaggga 3798
Query: 545 acctaagttttgctcgaaacagaagtggcaatcagtacgctcttttgaactaaaccggca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3797 acctaagttttgctcgaaacagaagtggcaatcagtacgctcttttgaactaaaccggca 3738
Query: 605 gtgcgtatcaattggaacaaaatggctttaaagatcaattctgctattgccgtgtgc-gs 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3737 gtgcgtatcaattggaacaaaatggctttaaagatcaattctgctattgccgtgtgcggc 3678
Query: 664 ggtaaattgttgaagttgtctcacttttcatcatgtacaggaacagacatggatgttaat 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3677 ggtaaattgttgaagttgtctcacttttcatcatgtacaggaacagacatggatgttaat 3618
Query: 724 ttgtatttgccaaaacaatattacactagcattgacgactcaaaactgattcctagtgtc 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3617 ttgtatttgccaaaacaatattacactagcattgacgactcaaaactgattcctagtgtc 3558
Query: 784 ttgtatttatctggtttaacgtgtacacctcaaaatgcttcggagaaagctttctggcag 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3557 ttgtatttatctggtttaacgtgtacacctcaaaatgcttcggagaaagctttctggcag 3498
Query: 844 attcaggctgataagttcggctttgcagttattttcccagacacatctccaagaggagac 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497 attcaggctgataagttcggctttgcagttattttcccagacacatctccaagaggagac 3438
Query: 904 ggtg 907
||||
Sbjct: 3437 ggtg 3434
>3x_Contig708
Length = 1983
Score = 526 bits (265), Expect = e-149
Identities = 265/265 (100%)
Strand = Plus / Minus
Query: 1 taagggacgctatcaggatgagatacgatccaattgatttcccagcgcttgatgacgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagggacgctatcaggatgagatacgatccaattgatttcccagcgcttgatgacgatg 206
Query: 61 aggaggaagaagaggctgaagataatgaggatagagactctcaaaatggagaggattctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aggaggaagaagaggctgaagataatgaggatagagactctcaaaatggagaggattctc 146
Query: 121 aaaaccagggactcgcttctactgaaaatgtaaaaccgactgcatctgacgaggttaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 aaaaccagggactcgcttctactgaaaatgtaaaaccgactgcatctgacgaggttaaag 86
Query: 181 aagagtctgttcaatcagccactaatgaattagcctctcaaaaggatgaagatattaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aagagtctgttcaatcagccactaatgaattagcctctcaaaaggatgaagatattaaac 26
Query: 241 cggaatcacctgtatagtttacctc 265
|||||||||||||||||||||||||
Sbjct: 25 cggaatcacctgtatagtttacctc 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,461
Number of Sequences: 1807
Number of extensions: 16461
Number of successful extensions: 2263
Number of sequences better than 1.0e-20: 2
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)